I find a lot of ported designs suffer from colouration, in both speakers and subs. My speakers seem to do well with cabinet colouration even though they arent decidedly high end, and I think that has something to do with lack of cabinet, they are small speakers after all in the grand scheme of things.
When it comes to subs, the colouration from larger cabinets can sometimes be too obvious, and one of the strong points of the Ultra was a distinct lack of any of that colouration. However, you can go to far, and even in real life there are harmonics. Some of them should be there and what the Ultra does is strive for accuracy to such a level that I think it gets slightly robbed of the sound quality. Of course, the quality issue with the ultra isnt because its quality is bad, because its not, its just that its too clean and sounds to be missing something to my ears. One driver in a very large cabinet ( size being relative to the particular driver) leads to a very depth focused sound, which at some point becomes to clean or empty further up in the bass content.
I dont think its any coincidence that the Ultra is sold as a sub to match a full size speaker setup, because the speakers sound changes with size too, and some of life's harmonics etc, are produced by the speakers so the sub doesnt have to and it can concentrate on going deep and doing it cleanly. The M&K subwoofers have a different focus, and that is to add the upper bass sound in there becasue the speakers they are designed to work with are sats, and its those doing the very clean sound in that case.
I believe there should always be some distortion, after all, even your ears distort sound given enough welly. We like a certain amount of distortion and to have non is like having your favourite meal, but having it made without any of the ingredients that are bad for you, in doing so you will also rob it of some flavour. For me, this is what lead to my replacement of the Ultra. My sound now sounds just as deep to me, and it certainly seems to pressurize my room just as much as the ultra did, but it also has more upper bass that the Ultra just sounds to be missing. To boot, it sounds more articulate, has more detail and texture, sounds cleaner and is considerably more musical. There is no detectable (to my ears) cabinet sound, which being sealed is helped out massively, and all in all its giving me everything I ever thought I would want. Ive not heard better, but besides the MK's Ive not been lucky enough to listen to many subs costing more than 1k
Like you say Nimby, the small things like car doors are what seem to make the real difference, and to me my setup never sounded so good, and it brings a whole new level to films. Thunder and distant thunder has always been very hard to get right in the home, but its never sounded so realistic. A door slam move more air than than most subs, and the difference is clear when your subs ability increases. For me, the .1 channel is the bottom of the building that is your HT, its the foundations. Get the foundations right and your on your way to an impressive build, and the more substantial those foundations, the better. With the right subs, your speakers will also sound much better, and most people when starting out, dont realise a good sub isnt just about good bass, its about how that good bass also affects the rest of your system too, and its a surprisingly large amount.